CDS

Accession Number TCMCG057C38769
gbkey CDS
Protein Id XP_018442394.1
Location complement(join(2918255..2918565,2918656..2918705,2918707..2918801,2918871..2919127,2919130..2919358))
Gene LOC108814340
GeneID 108814340
Organism Raphanus sativus

Protein

Length 315aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018586892.1
Definition PREDICTED: LOW QUALITY PROTEIN: 3-dehydrosphinganine reductase TSC10B-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Q
Description Belongs to the short-chain dehydrogenases reductases (SDR) family
KEGG_TC -
KEGG_Module M00094        [VIEW IN KEGG]
M00099        [VIEW IN KEGG]
KEGG_Reaction R02978        [VIEW IN KEGG]
KEGG_rclass RC00089        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K04708        [VIEW IN KEGG]
EC 1.1.1.102        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00600        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00600        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005615        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006643        [VIEW IN EMBL-EBI]
GO:0006665        [VIEW IN EMBL-EBI]
GO:0006666        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016614        [VIEW IN EMBL-EBI]
GO:0016616        [VIEW IN EMBL-EBI]
GO:0030148        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042180        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044421        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046467        [VIEW IN EMBL-EBI]
GO:0046519        [VIEW IN EMBL-EBI]
GO:0047560        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0097164        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCCAGTTCTGCTATCTTCCTTTTCTTGACTCTCTTCATCGTTTCTCTTCTCATCATCTTGGCTTTGATCGCACGTCCTAGACCCGTCAAGATCCCGATAAAGTCACGCCACGTCTTCATCACGGGTGGATCAAGCGGCATAGGTCTCGCTCTCGCCCACCTTGCCGCCTCCGAGGGAGCTCGAGTCTCCATCCTCGCACGCTCCGTCTCTAAGCTAGCCGATGAAACGTTCTCTGCCGACGTTCGTGACTACGATGCCGTTTTTAGAGCTGTTGACCAATCAGGGCCCATCGATGTGCTGATCGTAAACCAAGGCGTGTTTATAGGGAAGGAGCTTGAGAAACAGAGTATGGAAGAAGTCAAGTTCATGATCGATGTGAATCTTGTGGGAAGCTTCAATGTGATCAAGGCTGCTTTGCCCTTAATGAAAGGTCGTGGTGGACCTGCCTCCATTTCTCTTGTTTCCTCTCAAGCTGGTCAGGCAGGAATCTATGGTTACACTGCATACTCAGCGAGCAAGTTTGGGCTTCAGGGCTTAGCGCAAGCATTGCAGCAAGAAGTTATCTCTCATGACATTGTGTCTCTTCTGTTTCCTCCAGACACTGATACACCTGGGTTTCAAGAAGAACAGAGGAAGAGGCCAGAGCTCACTTCCATCATTGCCGCATCCTCAGGCTCGATGAAAACCAAGGAAGTAGCCAAGATATGTATGGATGGTATCAAAGCAGGAAAGTTCACAGTGACGTGCCATTTCGTTGGCTACTTGCTGTCTATTGTGACCAGTGGCATGTCTCCTCAGAGATCGTTTTGGCATGCTTTCAACAAAGTTATGTTCGGTGGTCTTGTTAGATTCGTTGGTTTGTTTTTCCAATGGACTTGGTATAACACCATAGAAAAATGGAGCAATAGCAAAACAAAACATCCAATATCAAGTTAG
Protein:  
MAASSAIFLFLTLFIVSLLIILALIARPRPVKIPIKSRHVFITGGSSGIGLALAHLAASEGARVSILARSVSKLADAXTFSADVRDYDAVFRAVDQSGPIDVLIVNQGVFIGKELEKQSMEEVKFMIDVNLVGSFNVIKAALPLMKGRGGPASISLVSSQAGQAGIYGYTAYSASKFGLQGLAQALQQEVISHDIXVSLLFPPDTDTPGFQEEQRKRPELTSIIAASSGSMKTKEVAKICMDGIKAGKFTVTCHFVGYLLSIVTSGMSPQRSFWHAFNKVMFGGLVRFVGLFFQWTWYNTIEKWSNSKTKHPISS